Greehey CCRI Archives
Molecular Cancer Therapeutics: Prospective Clinical Sequencing of Adult Glioma
May 1, 2019Siyuan Zheng, Kristin Alfaro-Munoz, Wei Wei, Xiaojing Wang, Fang Wang, Agda Karina Eterovic, Kenna R Mills Shaw, Funda Meric-Bernstam, Gregory N Fuller, Ken Chen, Roel G Verhaak, Gordon B Mills, WK Alfred Yung, Shiao-Pei Weathers, John F de Groot Malig …
Genome Research: PepQuery enables fast, accurate, and convenient proteomic validation of novel genomic alterations
March 1, 2019Bo Wen, Xiaojing Wang, Bing Zhang Massively parallel or second-generation sequencing-based genomic studies continuously identify new genomic alterations that may lead to novel protein sequences, which are attractive candidates for disease biomarkers an …
Genome Biology: The proBAM and proBed standard formats: enabling a seamless integration of genomics and proteomics data
December 1, 2018Gerben Menschaert, Xiaojing Wang, Andrew R Jones, Fawaz Ghali, David Fenyö, Volodimir Olexiouk, Bing Zhang, Eric W Deutsch, Tobias Ternent, Juan Antonio Vizcaíno On behalf of The Human Proteome Organization (HUPO) Proteomics Standards Initiative, we in …
International Journal of Mass Spectrometry: Comprehensive and sensitive proteogenomics data analysis strategy based on complementary multi-stage database search
April 1, 2018Inamul Hasan Madar, Wonyeop Lee, Xiaojing Wang, Seung-Ik Ko, Hokeun Kim, Dong-Gi Mun, Bing Zhang, Eunok Paek, Sang-Won Lee Proteogenomics provides opportunities for proteomic validation of gene structures, genomic alterations, and functional relevance …
Molecular & Cellular Proteomics: Detection of proteome diversity resulted from alternative splicing is limited by trypsin cleavage specificity
March 1, 2018Xiaojing Wang, Simona G Codreanu, Bo Wen, Kai Li, Matthew C Chambers, Daniel C Liebler, Bing Zhang Alternative splicing dramatically increases transcriptome complexity but its contribution to proteome diversity remains controversial. Exon-exon junction …
UT Health SA Newsroom: Greehey Institute begins 2018 with new faculty studying children’s cancer
January 18, 2018The Greehey Children’s Cancer Research Institute at UT Health San Antonio is on an impressive and rising trajectory as 2018 begins. This includes the recruitment of seven new faculty members, further bolstering the Alamo City’s thriving biosciences sec …
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