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Rao Lab

Manjeet Rao, PhD

Deputy Director – Greehey CCRI
Co-Leader, Experimental, and Development Therapeutics,
Mays Cancer Center; Discipline Director, Cancer Biology – Graduate Program.

Rank: Professor
Department: Cell Systems & Anatomy
Office: 4.100.10
Tel: 210-562-9119
raom@uthscsa.edu

The overall goal of my laboratory is to develop more potent and less toxic drugs for treating adult and pediatric cancer patients. We have employed unbiased high throughput genomewide functional screens as well as small molecular screens to identify novel targets that are critical for growth, progression, and drug sensitivity in medulloblastoma and osteosarcoma. In particular, using the loss of function screens, we have identified key genes that play critical/causal roles in the growth and metastasis as well as in the chemo-sensitivity of osteosarcoma. Furthermore, by performing small molecule library screens, we have identified inhibitors of these proteins that may act as novel therapeutics for treating osteosarcoma. Another area of our interest involves understanding the role of RNA epigenetic modifiers in osteosarcoma. In particular, we have identified RNA demethylase as a driver protein that may amplify oncogenic programs in osteosarcoma by regulating DNA replication, DNA repair, and genomic integrity. We aim to develop novel small molecule inhibitors against RNA demethylase that can potentially serve as RNA mimetics, which can abolish the activity of this protein in OS.

Our approach includes a combination of fluorescence polarization-based high-throughput screening using small molecule libraries, cell-based studies, and structure-guided development of novel inhibitors. Towards that goal, we have identified a unique RNA target sequence comprising the core m6 A motif (GGACU) that binds to RNA demethylase with high affinity. Using this unique RNA target sequence, we have performed high-throughput screening of the FDA-approved drug library and identified inhibitors that can potentially inhibit the activity of this driver protein. We are currently testing the efficacy of the inhibitor/s in the PDX model. We plan to explore the possibility of repurposing these drugs in clinical trials in near future.

Our research endeavors have resulted in the clinical development of an anti-depression for treating triple-negative breast cancer patients (Imipramine Before Surgery in Treating Patients with Estrogen Receptor-Positive or Triple Negative Breast Cancer).  This study is a perfect example of a bench-to-bedside initiative.

We have identified novel microRNAs that act as a potent tumor suppressors in medulloblastoma. Interestingly, one of these miRNAs sensitizes vincristine as well as radiation response in c-myc amplified medulloblastoma by targeting microtubule dynamics and DNA damage response. We are currently testing the viability of this miRNA in a non-human primate model (in collaboration with Dr. Brigitte Widermann at NCI). We are in the process of scheduling a pre-IND meeting with the FDA to know more about the required IND-enabling studies.

In addition, we are testing the efficacy of this miRNA in the rat leptomeningioma model. The goal is to test whether the miRNA can be delivered via intraventricular injection to avoid any potential immune response or need for a sophisticated delivery vehicle. In the next 3-years, we plan on taking this miRNA to a phase I clinical trial.

UT Health San Antonio Faculty Profile: Manjeet Rao, PhD

Lab Research

Lab Staff

Desiree Denman
Teaching Assistant

Daisy Medina
Graduate Research Assistant

Saif Nirzhor
Graduate Student

Subapriya Rajamanickam, PhD
Instructor/Research

Panneerdoss Subbarayalu, PhD
Instructor/Research

Santosh Timilsina, PhD
Graduate Research Assistant

2021Donald G McEwen, Memorial Summer Undergraduate Research Program Student
  • Shresth Arya
  • Neil Gupta
  • Arhan Rao
  • Lanka Srilalitha (mentor, Dr. Subbarayalu)
Dr. Rao is actively recruiting graduate students to join his lab.

Email all inquiries

Lab Alumni

Dr. Nourhan Abdelfattah, PhD
Postdoctoral Fellow Houston Methodist Research Institute

Dr. J.Saadi Imam, PhD, MD
Postdoctoral Fellow – Residency (MD) Mayo Clinic Jacksonville

Dr. Sanjay Bansal, PhD
Postdoctoral Fellow Bristol-Myers Squibb

Dr. Behyar Zoghi, MD, PhD
Postdoctoral Fellow – Hematologist Methodist Hospital, San Antonio

Dr. Yao-Fu-Chang, PhD
Postdoctoral Fellow Scientific Writer, Dallas

Jason Plyler
Graduate Student Mirna Therapeutics

Pooja Yadav, PhD
Scientist, Flagship Pioneering

Featured News

International Journal of Molecular Sciences: A Comprehensive Analysis into the Therapeutic Application of Natural Products as SIRT6 Modulators in Alzheimer’s Disease, Aging, Cancer, Inflammation, and Diabetes (Rao Lab)

Future Focus: San Antonio lands one of its largest Cancer Grants to Bring in New Talent

Manjeet Rao, PhD, Awarded NCI, R01 Grant to Test Efficacy of Novel Drug

News

ELife: Structure of METTL3-METTL14 with an m6A nucleotide reveals insights into m6A conversion and sensing (Rao, Gupta, et al)
February 11, 2025

Molecular Cancer Therapeutics: Abstract B016: RNA demethylase ALKBH5 drives medulloblastoma growth and progression (Rao, Chen, Gupta, & Houghton Labs)
November 18, 2024

Precision Oncology: Pharmacological inhibition of the LIF/LIFR autocrine loop reveals vulnerability of ovarian cancer cells to ferroptosis (Chen, Lai, Rao, et al)
June 17, 2024

All news